BWP Informatics SOPs
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Background
Workflow
Software components
Barcode Data Standard
BWP Data Standard Extension
Naming conventions
FIMS
Populating the FIMS spreadsheet
FIMS spreadsheet validation and upload
LIMS
Geneious introduction
Connecting with the Geneious Biocode Plugin
Generating extraction plates
Generating PCR Plates
Generating cycle sequencing plates
Sequence Assembly and Publication
Downloading traces from LIMS
Assembling contigs
Quality control of assembled contigs
Marking assemblies as Pass or Fail in LIMS
GenBank Upload
Annotating for ITS GenBank Upload
Troubleshooting
LIMS Connection Troubleshooting
Migrating the BWP LIMS Database
BWP Informatics SOPs
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